{
  "_id": "6a1d49191d7bb097a0a42c68",
  "Package": "AvInertia",
  "Title": "Calculate the Inertial Properties of a Flying Bird",
  "Version": "0.0.2",
  "Authors@R": "c(person(given = \"Christina\",\nfamily = \"Harvey\",\nrole = c(\"aut\", \"cre\"),\nemail = \"harveyca@umich.edu\",\ncomment = c(ORCID = \"0000-0002-2830-0844\")),\nperson(given = \"Vikram B.\",\nfamily = \"Baliga\",\nrole = \"aut\",\nemail = \"vbaliga87@gmail.com\",\ncomment = c(ORCID = \"0000-0002-9367-8974\")),\nperson(given = \"Jasmin C.M.\",\nfamily = \"Wong\",\nrole = \"aut\",\nemail = \"jwong@zoology.ubc.ca\",\ncomment = c(ORCID = \"0000-0003-4648-2503\")))",
  "Description": "Tools to compute the center of gravity and moment of\ninertia tensor of any flying bird. The tools function by\nmodeling a bird as a composite structure of simple geometric\nobjects. This requires detailed morphological measurements of\nbird specimens although those obtained for the associated paper\nhave been included in the package for use. Refer to the\nvignettes and supplementary material for detailed information\non the package function.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.1.1.9000",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/charvey23/AvInertia",
  "BugReports": "https://github.com/charvey23/AvInertia/issues",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://charvey23.r-universe.dev",
  "Date/Publication": "2022-03-24 15:06:53 UTC",
  "RemoteUrl": "https://github.com/charvey23/avinertia",
  "RemoteRef": "HEAD",
  "RemoteSha": "f37f7d9068625925cf110b5e38519adec1f54c65",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 08:52:24 UTC",
    "User": "root"
  },
  "Author": "Christina Harvey [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-2830-0844>),\nVikram B. Baliga [aut] (ORCID: <https://orcid.org/0000-0002-9367-8974>),\nJasmin C.M. Wong [aut] (ORCID: <https://orcid.org/0000-0003-4648-2503>)",
  "Maintainer": "Christina Harvey <harveyca@umich.edu>",
  "MD5sum": "df5cc6b146a701909fa7bebd7994250e",
  "_user": "charvey23",
  "_type": "src",
  "_file": "AvInertia_0.0.2.tar.gz",
  "_fileid": "6f5f5fd3b4fda6f3500dbd66963b28d50f32fff0ea808fcf745e59dbf119c409",
  "_filesize": 287264,
  "_sha256": "6f5f5fd3b4fda6f3500dbd66963b28d50f32fff0ea808fcf745e59dbf119c409",
  "_created": "2026-06-01T08:52:24.000Z",
  "_published": "2026-06-01T08:55:53.158Z",
  "_distro": "noble",
  "_jobs": [
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  "_buildurl": "https://github.com/r-universe/charvey23/actions/runs/26744790950",
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  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/charvey23/avinertia",
  "_commit": {
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    "author": "charvey23 <harveyca@umich.edu>",
    "committer": "charvey23 <harveyca@umich.edu>",
    "message": "update package to refer to the published paper\n",
    "time": 1648134413
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  "_maintainer": {
    "name": "Christina Harvey",
    "email": "harveyca@umich.edu",
    "login": "charvey23",
    "linkedin": "in/christina-a-harvey",
    "description": "",
    "uuid": 33333375,
    "orcid": "0000-0002-2830-0844"
  },
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  "_dependencies": [
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      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
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      "package": "pracma",
      "role": "Imports"
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    {
      "package": "readxl",
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    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
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      "package": "tidyr",
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    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "charvey23",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 6,
  "_contributors": [
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      "count": 185,
      "uuid": 33333375
    },
    {
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  ],
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    "type": "user",
    "name": "Christina Harvey"
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  "_downloads": {
    "count": 190,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/AvInertia"
  },
  "_devurl": "https://github.com/charvey23/avinertia",
  "_searchresults": 32,
  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/charvey23/avinertia",
  "_realowner": "charvey23",
  "_cranurl": true,
  "_releases": [
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      "version": "0.0.1",
      "date": "2021-07-22"
    },
    {
      "version": "0.0.2",
      "date": "2022-03-24"
    }
  ],
  "_exports": [
    "calc_inertia_conesolid",
    "calc_inertia_cylhollow",
    "calc_inertia_cylsolid",
    "calc_inertia_ellcone",
    "calc_inertia_ellcyl",
    "calc_inertia_ellipse",
    "calc_inertia_platerect",
    "calc_inertia_platetri",
    "calc_inertia_pyrasolid",
    "calc_rot",
    "calc_univec",
    "combine_inertialprop",
    "compute_feat_inertia",
    "density_optimizer",
    "kronecker_delta",
    "massprop_birdwing",
    "massprop_bones",
    "massprop_feathers",
    "massprop_head",
    "massprop_muscles",
    "massprop_neck",
    "massprop_pm",
    "massprop_restbody",
    "massprop_skin",
    "massprop_tail",
    "massprop_torso",
    "orient_feather",
    "parallelaxis",
    "plot_CGloc",
    "rotx",
    "store_data",
    "structural2VRP_feat"
  ],
  "_datasets": [
    {
      "name": "clean_pts",
      "title": "The identified peripheral and joint 3D positions.",
      "object": "clean_pts",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 10,
      "table": true,
      "tojson": true
    },
    {
      "name": "dat_bird_curr",
      "title": "Bird specific morphology dataset",
      "object": "dat_bird_curr",
      "class": [
        "data.frame"
      ],
      "fields": [
        "species",
        "BirdID",
        "bird_id.x",
        "species_common.x",
        "binomial.x",
        "use_body",
        "extend_neck",
        "Summed full body mass",
        "total_bird_mass",
        "body_length_cm",
        "wing_span_cm",
        "body_width_max",
        "body_height_max",
        "x_loc_of_body_max",
        "x_loc_humeral_insert",
        "y_loc_humeral_insert",
        "z_loc_humeral_insert",
        "z_dist_to_veh_ref_point_cm",
        "x_loc_leg_insertion",
        "body_width_at_leg_insert",
        "right_wing_mass_g",
        "left_wing_mass_g",
        "head_torsotail_mass_g",
        "head_length",
        "head_height",
        "head_mass",
        "neck_length",
        "neck_width",
        "neck_mass",
        "torsotail_length",
        "torsotail_mass",
        "x_loc_HeadCoG_cm",
        "z_loc_HeadCoG_cm",
        "x_loc_TorsotailCoG",
        "z_loc_TorsotailCoG",
        "right_leg_mass",
        "left_leg_mass_g",
        "tail_width",
        "tail_length",
        "tail_mass_g",
        "x_loc_TorsoCoG_cm",
        "z_loc_TorsoCoG_cm",
        "x_loc_tailCoG_cm",
        "z_loc_tailCoG_cm",
        "tail_depth_cm",
        "bird_id.y",
        "species_common.y",
        "binomial.y",
        "right_or_left",
        "Measured wing mass",
        "Summed wing mass",
        "humeralhead_thickness_mm",
        "elbow_thickness_mm",
        "wrist_thickness_mm",
        "cmctip_thickness_mm",
        "p10_thickness_mm",
        "p7_thickness_mm",
        "s1_thickness_mm",
        "s10_thickness_mm",
        "humerus_length_mm",
        "humerus_diameter_mm",
        "ulna_length_mm",
        "ulna_diameter_mm",
        "radius_length_mm",
        "radius_diameter_mm",
        "cmc_length_mm",
        "cmc_diameter_mm",
        "all_skin_coverts_mass",
        "humerus_mass_g",
        "ulna_mass_g",
        "radius_mass_g",
        "ulnare_mass_g",
        "radiale_mass_g",
        "cmc_mass_g",
        "brachial_muscle_mass",
        "antebrachial_muscle_mass",
        "manus_muscle_mass",
        "tertiary_mass",
        "p11_mass_g",
        "p10_mass_g",
        "p9_mass_g",
        "p8_mass_g",
        "p7_mass_g",
        "p6_mass_g",
        "p5_mass_g",
        "p4_mass_g",
        "p3_mass_g",
        "p2_mass_g",
        "p1_mass_g",
        "s1_mass_g",
        "s2_mass_g",
        "s3_mass_g",
        "s4_mass_g",
        "s5_mass_g",
        "s6_mass_g",
        "s7_mass_g",
        "s8_mass_g",
        "s9_mass_g",
        "s10_mass_g",
        "s11_mass_g",
        "s12_mass_g",
        "s13_mass_g",
        "s14_mass_g",
        "s15_mass_g",
        "s16_mass_g",
        "s17_mass_g",
        "s18_mass_g",
        "s19_mass_g",
        "s20_mass_g",
        "s21_mass_g",
        "s22_mass_g",
        "s23_mass_g",
        "s24_mass_g",
        "s25_mass_g",
        "s26_mass_g",
        "s27_mass_g",
        "s28_mass_g",
        "alular_mass_g",
        "wing_mass",
        "species_fullname",
        "barb_radius_um",
        "barb_distance_um",
        "Notes",
        "barb_distance",
        "barb_radius"
      ],
      "rows": 1,
      "table": true,
      "tojson": true
    },
    {
      "name": "dat_bone_curr",
      "title": "Wing bone specific morphology dataset",
      "object": "dat_bone_curr",
      "class": [
        "data.frame"
      ],
      "fields": [
        "bone",
        "bone_mass",
        "bone_len",
        "bone_out_rad",
        "bone_in_rad"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    },
    {
      "name": "dat_feat_curr",
      "title": "Flight feather specific morphology dataset",
      "object": "dat_feat_curr",
      "class": [
        "data.frame"
      ],
      "fields": [
        "feather",
        "distal vane",
        "proximal vane",
        "calamus length",
        "vane length",
        "rachis width",
        "vane_angle",
        "l_vane",
        "l_cal",
        "w_cal",
        "w_vd",
        "w_vp",
        "m_f",
        "species",
        "BirdID"
      ],
      "rows": 20,
      "table": true,
      "tojson": true
    },
    {
      "name": "dat_id_curr",
      "title": "Identification variables for current configuration",
      "object": "dat_id_curr",
      "class": [
        "data.frame"
      ],
      "fields": [
        "species",
        "BirdID",
        "TestID",
        "FrameID"
      ],
      "rows": 1,
      "table": true,
      "tojson": true
    },
    {
      "name": "dat_mat",
      "title": "Material properties.",
      "object": "dat_mat",
      "class": [
        "list"
      ],
      "fields": [],
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "calc_inertia_conesolid",
      "title": "Moment of inertia tensor of a solid circular cone pyramid",
      "topics": [
        "calc_inertia_conesolid"
      ]
    },
    {
      "page": "calc_inertia_cylhollow",
      "title": "Moment of inertia tensor of a hollow cylinder",
      "topics": [
        "calc_inertia_cylhollow"
      ]
    },
    {
      "page": "calc_inertia_cylsolid",
      "title": "Moment of inertia tensor of a solid cylinder",
      "topics": [
        "calc_inertia_cylsolid"
      ]
    },
    {
      "page": "calc_inertia_ellcone",
      "title": "Moment of inertia tensor of a solid elliptical cone - end of purple notebook derivation verified in green",
      "topics": [
        "calc_inertia_ellcone"
      ]
    },
    {
      "page": "calc_inertia_ellcyl",
      "title": "Moment of inertia tensor of a solid elliptical cylinder Reference: https://apps.dtic.mil/sti/pdfs/AD0274936.pdf",
      "topics": [
        "calc_inertia_ellcyl"
      ]
    },
    {
      "page": "calc_inertia_ellipse",
      "title": "Moment of inertia tensor of solid ellipse CG or a half ellipse centered on the base",
      "topics": [
        "calc_inertia_ellipse"
      ]
    },
    {
      "page": "calc_inertia_platerect",
      "title": "Moment of inertia tensor of a flat rectangular plate - assumes thickness is approximately zero Reference: https://apps.dtic.mil/sti/pdfs/AD0274936.pdf",
      "topics": [
        "calc_inertia_platerect"
      ]
    },
    {
      "page": "calc_inertia_platetri",
      "title": "Moment of inertia tensor of a flat triangular plate",
      "topics": [
        "calc_inertia_platetri"
      ]
    },
    {
      "page": "calc_inertia_pyrasolid",
      "title": "Moment of inertia tensor of a solid square pyramid Reference: https://apps.dtic.mil/sti/pdfs/AD0274936.pdf All outputs are based on an origin at the centered point on the base",
      "topics": [
        "calc_inertia_pyrasolid"
      ]
    },
    {
      "page": "calc_rot",
      "title": "A 3x3 rotation matrix constructed by projecting the new axes onto the original system. Likely results in rotation about all axes.",
      "topics": [
        "calc_rot"
      ]
    },
    {
      "page": "calc_univec",
      "title": "Determine the unit vector of any input vector",
      "topics": [
        "calc_univec"
      ]
    },
    {
      "page": "clean_pts",
      "title": "The identified peripheral and joint 3D positions.",
      "topics": [
        "clean_pts"
      ]
    },
    {
      "page": "combine_inertialprop",
      "title": "Combine body and wing inertial components.",
      "topics": [
        "combine_inertialprop"
      ]
    },
    {
      "page": "compute_feat_inertia",
      "title": "Compute the inertia of the individual feathers",
      "topics": [
        "compute_feat_inertia"
      ]
    },
    {
      "page": "dat_bird_curr",
      "title": "Bird specific morphology dataset",
      "topics": [
        "dat_bird_curr"
      ]
    },
    {
      "page": "dat_bone_curr",
      "title": "Wing bone specific morphology dataset",
      "topics": [
        "dat_bone_curr"
      ]
    },
    {
      "page": "dat_feat_curr",
      "title": "Flight feather specific morphology dataset",
      "topics": [
        "dat_feat_curr"
      ]
    },
    {
      "page": "dat_id_curr",
      "title": "Identification variables for current configuration",
      "topics": [
        "dat_id_curr"
      ]
    },
    {
      "page": "dat_mat",
      "title": "Material properties.",
      "topics": [
        "dat_mat"
      ]
    },
    {
      "page": "density_optimizer",
      "title": "Optimize torso section densities",
      "topics": [
        "density_optimizer"
      ]
    },
    {
      "page": "kronecker_delta",
      "title": "Kroneckerdelta function",
      "topics": [
        "kronecker_delta"
      ]
    },
    {
      "page": "massprop_birdwing",
      "title": "Calculate the center of gravity and moment of inertia for a halfspan wing.",
      "topics": [
        "massprop_birdwing"
      ]
    },
    {
      "page": "massprop_bones",
      "title": "Bone mass properties",
      "topics": [
        "massprop_bones"
      ]
    },
    {
      "page": "massprop_feathers",
      "title": "Feather mass properties",
      "topics": [
        "massprop_feathers"
      ]
    },
    {
      "page": "massprop_head",
      "title": "Head mass properties",
      "topics": [
        "massprop_head"
      ]
    },
    {
      "page": "massprop_muscles",
      "title": "Muscle mass properties",
      "topics": [
        "massprop_muscles"
      ]
    },
    {
      "page": "massprop_neck",
      "title": "Neck mass properties",
      "topics": [
        "massprop_neck"
      ]
    },
    {
      "page": "massprop_pm",
      "title": "Point-mass mass properties",
      "topics": [
        "massprop_pm"
      ]
    },
    {
      "page": "massprop_restbody",
      "title": "Calculate the center of gravity and moment of inertia for the head, neck, torso and tail.",
      "topics": [
        "massprop_restbody"
      ]
    },
    {
      "page": "massprop_skin",
      "title": "Calculates the mass properties of skin or tertiaries",
      "topics": [
        "massprop_skin"
      ]
    },
    {
      "page": "massprop_tail",
      "title": "Head mass properties",
      "topics": [
        "massprop_tail"
      ]
    },
    {
      "page": "massprop_torso",
      "title": "Torso and leg mass properties",
      "topics": [
        "massprop_torso"
      ]
    },
    {
      "page": "orient_feather",
      "title": "Determine the feather orientation",
      "topics": [
        "orient_feather"
      ]
    },
    {
      "page": "parallelaxis",
      "title": "Parallel axis theory",
      "topics": [
        "parallelaxis"
      ]
    },
    {
      "page": "plot_CGloc",
      "title": "Plot the center of gravity of each component",
      "topics": [
        "plot_CGloc"
      ]
    },
    {
      "page": "rotx",
      "title": "A 3x3 rotation matrix allowing rotation about the x-axis. Constructed using a cosine rotation matrix where the rotation angle in degrees is measured counterclockwise allowing positive rotation under the right hand rule.",
      "topics": [
        "rotx"
      ]
    },
    {
      "page": "store_data",
      "title": "Store data from the inertia calculations in long format",
      "topics": [
        "store_data"
      ]
    },
    {
      "page": "structural2VRP_feat",
      "title": "Transform feather specific inertial properties to current position",
      "topics": [
        "structural2VRP_feat"
      ]
    }
  ],
  "_readme": "https://github.com/charvey23/avinertia/raw/HEAD/README.md",
  "_rundeps": [
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    "cli",
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    {
      "source": "how-to-analyze-data.Rmd",
      "filename": "how-to-analyze-data.html",
      "title": "How to analyze data in AvInertia",
      "author": "Christina Harvey",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Determine the inertial characteristics of a flying bird.",
        "1. Determine the center of gravity of the bird's torso (including the legs)",
        "2. Calculate the inertia of the flight feathers about the tip of the calamus",
        "3. Determine the center of gravity of one of the bird's wings",
        "4. If computing for asymmetric case, input a different set of clean points (clean_pts)",
        "5. Combine all data and obtain the center of gravity, moment of inertia and principal axes of the bird"
      ],
      "created": "2020-09-13 17:33:06",
      "modified": "2021-06-28 21:38:04",
      "commits": 7
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